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Abstract Aqueous-soluble hydrocarbons dissolve into the ocean’s interior and structure deep-sea microbial populations influenced by natural oil seeps and spills. Among these hydrocarbons, n-pentane, is a seawater-soluble, volatile compound abundant in petroleum products and reservoirs, which partially partitions to the deep-water column following release from the seafloor. In this study, we explore the ecology and niche partitioning of two free-living Cycloclasticus strains recovered from seawater incubations with n-pentane and distinguish them as an open ocean variant and a seep-proximal variant, each with distinct capabilities for hydrocarbon catabolism. Comparative metagenomic analysis indicates the variant more frequently observed further from natural seeps encodes more general pathways for hydrocarbon consumption, including short-chain alkanes, aromatics, and long-chain alkanes, and also possesses redox versatility in the form of respiratory nitrate reduction and thiosulfate oxidation; in contrast, the seep variant specializes in short-chain alkanes and relies strictly on oxygen as the terminal electron acceptor. Both variants observed in our work were dominant ecotypes of Cycloclasticus observed during the Deepwater Horizon disaster, a conclusion supported by 16S rRNA gene analysis and read-recruitment of sequences collected from the submerged oil plume during active flow. A comparative genomic analysis of Cycloclasticus across various ecosystems suggests distinct strategies for hydrocarbon transformations among each clade. Our findings suggest Cycloclasticus is a versatile and opportunistic consumer of hydrocarbons and may have a greater role in the cycling of sulfur and nitrogen, thus contributing broad ecological impact to various ecosystems globally.more » « less
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Abstract Climate‐driven warming is projected to intensify wildfires, increasing their frequency and severity globally. Wildfires are an increasingly significant source of atmospheric deposition, delivering nutrients, organic matter, and trace metals to coastal and open ocean waters. These inputs have the potential to fertilize or inhibit microbial growth, yet their ecological impacts remain poorly understood. This study examines how ash leachate, derived from the 2017 Thomas Fire in California and lab‐produced ash from Oregon vegetation, affects coastal plankton communities. Shipboard experiments off the California coast examined how pre‐existing plankton biomass concentrations mediate responses to ash leachates. We found that ash leachate contained dissolved organic matter (DOM) that significantly increased bacterioplankton specific growth rates and DOM remineralization rates but had a negligible effect on bacterioplankton growth efficiency, suggesting low DOM bioavailability. Furthermore, ash‐derived DOM had a higher potential to accumulate in high biomass water, where pre‐existing DOM substrates may better support bacterial metabolism. Ash leachate had a neutral to negative effect on phytoplankton division rates and decreased microzooplankton grazing rates, particularly in low biomass water, leading to increased phytoplankton accumulation. Nanoeukaryotes accumulated in low biomass water, whereas picoeukaryotes andSynechococcusaccumulated in high biomass water. Our findings suggest that the influence of ash deposition on DOM cycling, phytoplankton accumulation, and broader marine food web dynamics depends on pre‐existing biomass levels. Understanding these interactions is critical for predicting the biogeochemical consequences of increasing wildfire activity on marine ecosystems.more » « less
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Abstract Cycloalkanes are abundant and toxic compounds in subsurface petroleum reservoirs and their fate is important to ecosystems impacted by natural oil seeps and spills. This study focuses on the microbial metabolism of methylcyclohexane (MCH) and methylcyclopentane (MCP) in the deep Gulf of Mexico. MCH and MCP are often abundant cycloalkanes observed in petroleum and will dissolve into the water column when introduced at the seafloor via a spill or natural seep. We conducted incubations with deep Gulf of Mexico (GOM) seawater amended with MCH and MCP at four stations. Within incubations with active respiration of MCH and MCP, we found that a novel genus of bacteria belonging to thePorticoccaceaefamily (Candidatus Reddybacter) dominated the microbial community. Using metagenome‐assembled genomes, we reconstructed the central metabolism ofCandidatus Reddybacter, identifying a novel clade of the particulate hydrocarbon monooxygenase (pmo) that may play a central role in MCH and MCP metabolism. Through comparative analysis of 174 genomes, we parsed the taxonomy of thePorticoccaceaefamily and found evidence suggesting the acquisition ofpmoand other genes related to the degradation of cyclic and branched hydrophobic compounds were likely key events in the ecology and evolution of this group of organisms.more » « less
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